J4_8UXB_012

3D structure

PDB id

8UXB (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S ribosome with unmodified P/E-tRNAPro(GGG) bound to slippery P-site CCC-C codon

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

GAGUAAUG*UG*CUAG*CC

Length

16 nucleotides

Bulged bases

8UXB|1|2|U|121

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8UXB|1|2|G|115
8UXB|1|2|A|116
8UXB|1|2|G|117
8UXB|1|2|U|118
8UXB|1|2|A|119
8UXB|1|2|A|120
8UXB|1|2|U|121
8UXB|1|2|G|122
*
8UXB|1|2|U|239
8UXB|1|2|G|240
*
8UXB|1|2|C|286
8UXB|1|2|U|287
8UXB|1|2|A|288
8UXB|1|2|G|289
*
8UXB|1|2|C|311
8UXB|1|2|C|312

Current chains

Chain 2

16S ribosomal RNA

Nearby chains

Chain u

30S ribosomal protein S16

Chain v

30S ribosomal protein S17