J4_8V03_012

3D structure

PDB id

8V03 (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S ribosome with unmodified P/E-tRNAPro(GGG) bound to slippery P-site CCC-C codon

Experimental method

ELECTRON MICROSCOPY

Resolution

4 Å

Loop

Sequence

GAGUAAUG*UG*CUAG*CC

Length

16 nucleotides

Bulged bases

8V03|1|2|U|121

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8V03|1|2|G|115
8V03|1|2|A|116
8V03|1|2|G|117
8V03|1|2|U|118
8V03|1|2|A|119
8V03|1|2|A|120
8V03|1|2|U|121
8V03|1|2|G|122
*
8V03|1|2|U|239
8V03|1|2|G|240
*
8V03|1|2|C|286
8V03|1|2|U|287
8V03|1|2|A|288
8V03|1|2|G|289
*
8V03|1|2|C|311
8V03|1|2|C|312

Current chains

Chain 2

16S ribosomal RNA

Nearby chains

Chain u

30S ribosomal protein S16

Chain v

Small ribosomal subunit protein uS17