J4_8VR4_008
3D structure
- PDB id
- 8VR4 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of Mycobacterium smegmatis 50S ribosomal subunit bound to HflX and erythromycin:50S-HflX-A-Ery
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.8 Å
Loop
- Sequence
- CCAAAG*UUGACUG*CAGGGA*UCGGG
- Length
- 24 nucleotides
- Bulged bases
- 8VR4|1|A|U|2572
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8VR4|1|A|C|2508
8VR4|1|A|C|2509
8VR4|1|A|A|2510
8VR4|1|A|A|2511
8VR4|1|A|A|2512
8VR4|1|A|G|2513
*
8VR4|1|A|U|2567
8VR4|1|A|U|2568
8VR4|1|A|G|2569
8VR4|1|A|A|2570
8VR4|1|A|C|2571
8VR4|1|A|U|2572
8VR4|1|A|G|2573
*
8VR4|1|A|C|2592
8VR4|1|A|A|2593
8VR4|1|A|G|2594
8VR4|1|A|G|2595
8VR4|1|A|G|2596
8VR4|1|A|A|2597
*
8VR4|1|A|U|2604
8VR4|1|A|C|2605
8VR4|1|A|G|2606
8VR4|1|A|G|2607
8VR4|1|A|G|2608
Current chains
- Chain A
- 23S ribosomal RNA
Nearby chains
- Chain P
- 50S Ribosomal Protein L18
- Chain X
- 50S ribosomal protein L27
- Chain c
- 50S Ribosomal Protein L33
- Chain e
- 50S ribosomal protein L35
Coloring options: