J4_8VUP_004
3D structure
- PDB id
- 8VUP (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. coli 70S ribosome with unmodified tRNAPro(GGG) in the e*/E conformation on a slippery CCC-C codon
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.4 Å
Loop
- Sequence
- GGUUC*GGUGAG*CU*AAUCGUAC
- Length
- 21 nucleotides
- Bulged bases
- 8VUP|1|1|G|1341
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8VUP|1|1|G|1310
8VUP|1|1|G|1311
8VUP|1|1|U|1312
8VUP|1|1|U|1313
8VUP|1|1|C|1314
*
8VUP|1|1|G|1338
8VUP|1|1|G|1339
8VUP|1|1|U|1340
8VUP|1|1|G|1341
8VUP|1|1|A|1342
8VUP|1|1|G|1343
*
8VUP|1|1|C|1404
8VUP|1|1|U|1405
*
8VUP|1|1|A|1597
8VUP|1|1|A|1598
8VUP|1|1|U|1599
8VUP|1|1|C|1600
8VUP|1|1|G|1601
8VUP|1|1|U|1602
8VUP|1|1|A|1603
8VUP|1|1|C|1604
Current chains
- Chain 1
- 23S ribosomal RNA
Nearby chains
- Chain T
- Large ribosomal subunit protein uL23
- Chain d
- 50S ribosomal protein L34
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