J4_8VUP_007
3D structure
- PDB id
- 8VUP (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. coli 70S ribosome with unmodified tRNAPro(GGG) in the e*/E conformation on a slippery CCC-C codon
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.4 Å
Loop
- Sequence
- CUG*CG*CCUAAGGUAG*CGAAUG
- Length
- 21 nucleotides
- Bulged bases
- 8VUP|1|1|U|1971
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8VUP|1|1|C|1833
8VUP|1|1|U|1834
8VUP|1|1|G|1835
*
8VUP|1|1|C|1905
8VUP|1|1|G|1906
*
8VUP|1|1|C|1924
8VUP|1|1|C|1925
8VUP|1|1|U|1926
8VUP|1|1|A|1927
8VUP|1|1|A|1928
8VUP|1|1|G|1929
8VUP|1|1|G|1930
8VUP|1|1|U|1931
8VUP|1|1|A|1932
8VUP|1|1|G|1933
*
8VUP|1|1|C|1967
8VUP|1|1|G|1968
8VUP|1|1|A|1969
8VUP|1|1|A|1970
8VUP|1|1|U|1971
8VUP|1|1|G|1972
Current chains
- Chain 1
- 23S ribosomal RNA
Nearby chains
- Chain 2
- Small subunit ribosomal RNA; SSU rRNA
- Chain B
- 50S ribosomal protein L2
Coloring options: