J4_8VVR_004

3D structure

PDB id

8VVR (explore in PDB, NAKB, or RNA 3D Hub)

Description

Post-decoding/Post-hydrolysis state obtained from Anisomycin-treated mammalian ribosomes

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

CC*GAGUCG*CAAAGCG*UAAG

Length

19 nucleotides

Bulged bases

8VVR|1|WA|C|309

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8VVR|1|WA|C|111
8VVR|1|WA|C|112
*
8VVR|1|WA|G|278
8VVR|1|WA|A|279
8VVR|1|WA|G|280
8VVR|1|WA|U|281
8VVR|1|WA|C|282
8VVR|1|WA|G|283
*
8VVR|1|WA|C|304
8VVR|1|WA|A|305
8VVR|1|WA|A|306
8VVR|1|WA|A|307
8VVR|1|WA|G|308
8VVR|1|WA|C|309
8VVR|1|WA|G|310
*
8VVR|1|WA|U|327
8VVR|1|WA|A|328
8VVR|1|WA|A|329
8VVR|1|WA|G|330

Current chains

Chain WA

28S rRNA

Nearby chains

Chain GA

L35

Chain HA

L36

Chain K

eL13

Chain M

eL15