J4_8VVR_010
3D structure
- PDB id
- 8VVR (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Post-decoding/Post-hydrolysis state obtained from Anisomycin-treated mammalian ribosomes
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- AGAUG*CAGUG*CGACC*GAGGGUGUAAAU
- Length
- 27 nucleotides
- Bulged bases
- 8VVR|1|WA|U|2556, 8VVR|1|WA|U|2765
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8VVR|1|WA|A|2553
8VVR|1|WA|G|2554
8VVR|1|WA|A|2555
8VVR|1|WA|U|2556
8VVR|1|WA|G|2557
*
8VVR|1|WA|C|2574
8VVR|1|WA|A|2575
8VVR|1|WA|G|2576
8VVR|1|WA|U|2577
8VVR|1|WA|G|2578
*
8VVR|1|WA|C|2587
8VVR|1|WA|G|2588
8VVR|1|WA|A|2589
8VVR|1|WA|C|2590
8VVR|1|WA|C|2591
*
8VVR|1|WA|G|2758
8VVR|1|WA|A|2759
8VVR|1|WA|G|2760
8VVR|1|WA|G|2761
8VVR|1|WA|G|2762
8VVR|1|WA|U|2763
8VVR|1|WA|G|2764
8VVR|1|WA|U|2765
8VVR|1|WA|A|2766
8VVR|1|WA|A|2767
8VVR|1|WA|A|2768
8VVR|1|WA|U|2769
Current chains
- Chain WA
- 28S rRNA
Nearby chains
- Chain FA
- L34
- Chain Y
- L27
Coloring options: