J4_8VVR_011

3D structure

PDB id

8VVR (explore in PDB, NAKB, or RNA 3D Hub)

Description

Post-decoding/Post-hydrolysis state obtained from Anisomycin-treated mammalian ribosomes

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

GG*UGUGAA*UGGAAAG*UC

Length

17 nucleotides

Bulged bases

8VVR|1|WA|A|2698

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8VVR|1|WA|G|2620
8VVR|1|WA|G|2621
*
8VVR|1|WA|U|2639
8VVR|1|WA|G|2640
8VVR|1|WA|U|2641
8VVR|1|WA|G|2642
8VVR|1|WA|A|2643
8VVR|1|WA|A|2644
*
8VVR|1|WA|U|2694
8VVR|1|WA|G|2695
8VVR|1|WA|G|2696
8VVR|1|WA|A|2697
8VVR|1|WA|A|2698
8VVR|1|WA|A|2699
8VVR|1|WA|G|2700
*
8VVR|1|WA|U|2720
8VVR|1|WA|C|2721

Current chains

Chain WA

28S rRNA

Nearby chains

Chain FA

L34

Chain JA

eL38

Chain Q

eL19

Chain T

eL22