J4_8VVR_014

3D structure

PDB id

8VVR (explore in PDB, NAKB, or RNA 3D Hub)

Description

Post-decoding/Post-hydrolysis state obtained from Anisomycin-treated mammalian ribosomes

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

CUAAG*UUG*CC*GGG

Length

13 nucleotides

Bulged bases

8VVR|1|WA|A|4236

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8VVR|1|WA|C|4233
8VVR|1|WA|U|4234
8VVR|1|WA|A|4235
8VVR|1|WA|A|4236
8VVR|1|WA|G|4237
*
8VVR|1|WA|U|4291
8VVR|1|WA|U|4292
8VVR|1|WA|G|4293
*
8VVR|1|WA|C|4320
8VVR|1|WA|C|4321
*
8VVR|1|WA|G|4330
8VVR|1|WA|G|4331
8VVR|1|WA|G|4332

Current chains

Chain WA

28S rRNA

Nearby chains

Chain D

uL18

Chain NA

eL42

Chain S

eL21