J4_8VVR_015

3D structure

PDB id

8VVR (explore in PDB, NAKB, or RNA 3D Hub)

Description

Post-decoding/Post-hydrolysis state obtained from Anisomycin-treated mammalian ribosomes

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

GUAA*UC*GUG*CGCC

Length

13 nucleotides

Bulged bases

8VVR|1|WA|U|4679

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8VVR|1|WA|G|4589
8VVR|1|WA|U|4590
8VVR|1|WA|A|4591
8VVR|1|WA|A|4592
*
8VVR|1|WA|U|4622
8VVR|1|WA|C|4623
*
8VVR|1|WA|G|4678
8VVR|1|WA|U|4679
8VVR|1|WA|G|4680
*
8VVR|1|WA|C|4714
8VVR|1|WA|G|4715
8VVR|1|WA|C|4716
8VVR|1|WA|C|4717

Current chains

Chain WA

28S rRNA

Nearby chains

Chain B

uL3

Chain N

uL13

Chain U

L23