J4_8VVS_012
3D structure
- PDB id
- 8VVS (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Post-decoding post-hydrolysis state obtained from merged datasets of elongation inhibitor-treated mammalian ribosomes
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- GACUG*CAAAG*UGAUU*AUGAAC
- Length
- 21 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8VVS|1|WA|G|3636
8VVS|1|WA|A|3637
8VVS|1|WA|C|3638
8VVS|1|WA|U|3639
8VVS|1|WA|G|3640
*
8VVS|1|WA|C|3652
8VVS|1|WA|A|3653
8VVS|1|WA|A|3654
8VVS|1|WA|A|3655
8VVS|1|WA|G|3656
*
8VVS|1|WA|U|3692
8VVS|1|WA|G|3693
8VVS|1|WA|A|3694
8VVS|1|WA|U|3695
8VVS|1|WA|U|3696
*
8VVS|1|WA|A|3823
8VVS|1|WA|U|3824
8VVS|1|WA|G|3825
8VVS|1|WA|A|3826
8VVS|1|WA|A|3827
8VVS|1|WA|C|3828
Current chains
- Chain WA
- 28S rRNA
Nearby chains
- Chain A
- uL2
- Chain MA
- eL41
- Chain OA
- eL43
- Chain ZA
- Small subunit ribosomal RNA; SSU rRNA
Coloring options: