J4_8WHX_014

3D structure

PDB id

8WHX (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo- EM structure of Mycobacterium smegmatis 70S ribosome and RafH.

Experimental method

ELECTRON MICROSCOPY

Resolution

2.8 Å

Loop

Sequence

UU*AAUACAC*GGAAAG*CG

Length

17 nucleotides

Bulged bases

8WHX|1|a|C|179, 8WHX|1|a|A|180

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8WHX|1|a|U|140
8WHX|1|a|U|141
*
8WHX|1|a|A|175
8WHX|1|a|A|176
8WHX|1|a|U|177
8WHX|1|a|A|178
8WHX|1|a|C|179
8WHX|1|a|A|180
8WHX|1|a|C|181
*
8WHX|1|a|G|207
8WHX|1|a|G|208
8WHX|1|a|A|209
8WHX|1|a|A|210
8WHX|1|a|A|211
8WHX|1|a|G|212
*
8WHX|1|a|C|219
8WHX|1|a|G|220

Current chains

Chain a

16S rRNA

Nearby chains

Chain r

30S ribosomal protein S17

Chain u

30S ribosomal protein S20