J4_8WI7_011

3D structure

PDB id

8WI7 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo- EM structure of Mycobacterium smegmatis 70S ribosome, bS1 and RafH.

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

GAGUAACAC*GGC*GUAG*CC

Length

18 nucleotides

Bulged bases

8WI7|1|a|C|117

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8WI7|1|a|G|111
8WI7|1|a|A|112
8WI7|1|a|G|113
8WI7|1|a|U|114
8WI7|1|a|A|115
8WI7|1|a|A|116
8WI7|1|a|C|117
8WI7|1|a|A|118
8WI7|1|a|C|119
*
8WI7|1|a|G|238
8WI7|1|a|G|239
8WI7|1|a|C|240
*
8WI7|1|a|G|286
8WI7|1|a|U|287
8WI7|1|a|A|288
8WI7|1|a|G|289
*
8WI7|1|a|C|311
8WI7|1|a|C|312

Current chains

Chain a

16S rRNA

Nearby chains

Chain m

30S ribosomal protein S12

Chain q

30S ribosomal protein S16

Chain r

30S ribosomal protein S17