J4_8WIB_001

3D structure

PDB id

8WIB (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo- EM structure of Mycobacterium smegmatis 70S ribosome, E- tRNA and RafH.

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

CUAAAC*GGGUUG*CUG*UAAG

Length

19 nucleotides

Bulged bases

8WIB|1|A|U|316, 8WIB|1|A|U|493

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8WIB|1|A|C|269
8WIB|1|A|U|270
8WIB|1|A|A|271
8WIB|1|A|A|272
8WIB|1|A|A|273
8WIB|1|A|C|274
*
8WIB|1|A|G|312
8WIB|1|A|G|313
8WIB|1|A|G|314
8WIB|1|A|U|315
8WIB|1|A|U|316
8WIB|1|A|G|317
*
8WIB|1|A|C|492
8WIB|1|A|U|493
8WIB|1|A|G|494
*
8WIB|1|A|U|509
8WIB|1|A|A|510
8WIB|1|A|A|511
8WIB|1|A|G|512

Current chains

Chain A

23S rRNA

Nearby chains