J4_8WIB_006

3D structure

PDB id

8WIB (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo- EM structure of Mycobacterium smegmatis 70S ribosome, E- tRNA and RafH.

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

GUAC*GGG*CAUAG*CGAAUUC

Length

19 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8WIB|1|A|G|1664
8WIB|1|A|U|1665
8WIB|1|A|A|1666
8WIB|1|A|C|1667
*
8WIB|1|A|G|1686
8WIB|1|A|G|1687
8WIB|1|A|G|1688
*
8WIB|1|A|C|1747
8WIB|1|A|A|1748
8WIB|1|A|U|1749
8WIB|1|A|A|1750
8WIB|1|A|G|1751
*
8WIB|1|A|C|1762
8WIB|1|A|G|1763
8WIB|1|A|A|1764
8WIB|1|A|A|1765
8WIB|1|A|U|1766
8WIB|1|A|U|1767
8WIB|1|A|C|1768

Current chains

Chain A

23S rRNA

Nearby chains