J4_8WIB_015

3D structure

PDB id

8WIB (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo- EM structure of Mycobacterium smegmatis 70S ribosome, E- tRNA and RafH.

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

UU*AAUACAC*GGAAAG*CG

Length

17 nucleotides

Bulged bases

8WIB|1|a|C|179, 8WIB|1|a|A|180

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8WIB|1|a|U|140
8WIB|1|a|U|141
*
8WIB|1|a|A|175
8WIB|1|a|A|176
8WIB|1|a|U|177
8WIB|1|a|A|178
8WIB|1|a|C|179
8WIB|1|a|A|180
8WIB|1|a|C|181
*
8WIB|1|a|G|207
8WIB|1|a|G|208
8WIB|1|a|A|209
8WIB|1|a|A|210
8WIB|1|a|A|211
8WIB|1|a|G|212
*
8WIB|1|a|C|219
8WIB|1|a|G|220

Current chains

Chain a

16S rRNA

Nearby chains

Chain r

30S ribosomal protein S17

Chain u

30S ribosomal protein S20