J4_8WIC_006

3D structure

PDB id

8WIC (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo- EM structure of Mycobacterium smegmatis 50S ribosomal subunit (body 1) of 70S ribosome, E- tRNA and RafH.

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

GUAC*GGG*CAUAG*CGAAUUC

Length

19 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8WIC|1|A|G|1664
8WIC|1|A|U|1665
8WIC|1|A|A|1666
8WIC|1|A|C|1667
*
8WIC|1|A|G|1686
8WIC|1|A|G|1687
8WIC|1|A|G|1688
*
8WIC|1|A|C|1747
8WIC|1|A|A|1748
8WIC|1|A|U|1749
8WIC|1|A|A|1750
8WIC|1|A|G|1751
*
8WIC|1|A|C|1762
8WIC|1|A|G|1763
8WIC|1|A|A|1764
8WIC|1|A|A|1765
8WIC|1|A|U|1766
8WIC|1|A|U|1767
8WIC|1|A|C|1768

Current chains

Chain A

23S rRNA

Nearby chains