J4_8Y37_008
3D structure
- PDB id
- 8Y37 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of Staphylococcus aureus (15B196) 50S ribosome in complex with MCX-190.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.53 Å
Loop
- Sequence
- CAAAGG*CUUGAC*GGG*CGG
- Length
- 18 nucleotides
- Bulged bases
- 8Y37|1|A|A|2315
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8Y37|1|A|C|2312
8Y37|1|A|A|2313
8Y37|1|A|A|2314
8Y37|1|A|A|2315
8Y37|1|A|G|2316
8Y37|1|A|G|2317
*
8Y37|1|A|C|2369
8Y37|1|A|U|2370
8Y37|1|A|U|2371
8Y37|1|A|G|2372
8Y37|1|A|A|2373
8Y37|1|A|C|2374
*
8Y37|1|A|G|2397
8Y37|1|A|G|2398
8Y37|1|A|G|2399
*
8Y37|1|A|C|2408
8Y37|1|A|G|2409
8Y37|1|A|G|2410
Current chains
- Chain A
- 23S ribosomal RNA
Nearby chains
- Chain 1
- Large ribosomal subunit protein bL33B
- Chain 3
- Large ribosomal subunit protein bL35
- Chain U
- Large ribosomal subunit protein bL27
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