J4_9B4Z_003
3D structure
- PDB id
- 9B4Z (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. coli 70S ribosome complex (N1-methylated 16S A1408 + arbekacin)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.2 Å
Loop
- Sequence
- GCG*CGAAAG*CCGUAAACGAUG*CC
- Length
- 23 nucleotides
- Bulged bases
- 9B4Z|1|AA|C|576, 9B4Z|1|AA|A|815
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9B4Z|1|AA|G|575
9B4Z|1|AA|C|576
9B4Z|1|AA|G|577
*
9B4Z|1|AA|C|764
9B4Z|1|AA|G|765
9B4Z|1|AA|A|766
9B4Z|1|AA|A|767
9B4Z|1|AA|A|768
9B4Z|1|AA|G|769
*
9B4Z|1|AA|C|810
9B4Z|1|AA|C|811
9B4Z|1|AA|G|812
9B4Z|1|AA|U|813
9B4Z|1|AA|A|814
9B4Z|1|AA|A|815
9B4Z|1|AA|A|816
9B4Z|1|AA|C|817
9B4Z|1|AA|G|818
9B4Z|1|AA|A|819
9B4Z|1|AA|U|820
9B4Z|1|AA|G|821
*
9B4Z|1|AA|C|879
9B4Z|1|AA|C|880
Current chains
- Chain AA
- 16S ribosomal RNA
Nearby chains
- Chain AH
- 30S ribosomal protein S8
- Chain AL
- 30S ribosomal protein S12
- Chain AO
- 30S ribosomal protein S15
- Chain AQ
- 30S ribosomal protein S17
- Chain AU
- 30S ribosomal protein S21
- Chain BA
- Large subunit ribosomal RNA; LSU rRNA
Coloring options: