J4_9B4Z_011

3D structure

PDB id

9B4Z (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S ribosome complex (N1-methylated 16S A1408 + arbekacin)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.2 Å

Loop

Sequence

GGUUC*GGUGAG*CU*AAUCGUAC

Length

21 nucleotides

Bulged bases

9B4Z|1|BA|G|1341

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9B4Z|1|BA|G|1310
9B4Z|1|BA|G|1311
9B4Z|1|BA|U|1312
9B4Z|1|BA|U|1313
9B4Z|1|BA|C|1314
*
9B4Z|1|BA|G|1338
9B4Z|1|BA|G|1339
9B4Z|1|BA|U|1340
9B4Z|1|BA|G|1341
9B4Z|1|BA|A|1342
9B4Z|1|BA|G|1343
*
9B4Z|1|BA|C|1404
9B4Z|1|BA|U|1405
*
9B4Z|1|BA|A|1597
9B4Z|1|BA|A|1598
9B4Z|1|BA|U|1599
9B4Z|1|BA|C|1600
9B4Z|1|BA|G|1601
9B4Z|1|BA|U|1602
9B4Z|1|BA|A|1603
9B4Z|1|BA|C|1604

Current chains

Chain BA

23S ribosomal RNA

Nearby chains

Chain B2

50S ribosomal protein L34

Chain BT

50S ribosomal protein L23