J4_9BDP_007

3D structure

PDB id

9BDP (explore in PDB, NAKB, or RNA 3D Hub)

Description

80S ribosome bound with angiogenin and complex of eEF1A and Ala-tRNAAla

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

GG*UGUGAA*UGGAAAG*UC

Length

17 nucleotides

Bulged bases

9BDP|1|A28S|A|2696

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9BDP|1|A28S|G|2618
9BDP|1|A28S|G|2619
*
9BDP|1|A28S|U|2637
9BDP|1|A28S|G|2638
9BDP|1|A28S|U|2639
9BDP|1|A28S|G|2640
9BDP|1|A28S|A|2641
9BDP|1|A28S|A|2642
*
9BDP|1|A28S|U|2692
9BDP|1|A28S|G|2693
9BDP|1|A28S|G|2694
9BDP|1|A28S|A|2695
9BDP|1|A28S|A|2696
9BDP|1|A28S|A|2697
9BDP|1|A28S|G|2698
*
9BDP|1|A28S|U|2718
9BDP|1|A28S|C|2719

Current chains

Chain A28S

28S rRNA

Nearby chains

Chain AL19

60S ribosomal protein L19

Chain AL22

Large ribosomal subunit protein eL22

Chain AL34

60S ribosomal protein L34

Chain AL38

Large ribosomal subunit protein eL38