J4_9BDP_010

3D structure

PDB id

9BDP (explore in PDB, NAKB, or RNA 3D Hub)

Description

80S ribosome bound with angiogenin and complex of eEF1A and Ala-tRNAAla

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

CUAAGG*CUUG*CC*GGG

Length

15 nucleotides

Bulged bases

9BDP|1|A28S|A|4234

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9BDP|1|A28S|C|4231
9BDP|1|A28S|U|4232
9BDP|1|A28S|A|4233
9BDP|1|A28S|A|4234
9BDP|1|A28S|G|4235
9BDP|1|A28S|G|4236
*
9BDP|1|A28S|C|4288
9BDP|1|A28S|U|4289
9BDP|1|A28S|U|4290
9BDP|1|A28S|G|4291
*
9BDP|1|A28S|C|4318
9BDP|1|A28S|C|4319
*
9BDP|1|A28S|G|4328
9BDP|1|A28S|G|4329
9BDP|1|A28S|G|4330

Current chains

Chain A28S

28S rRNA

Nearby chains

Chain AL05

60S ribosomal protein L5

Chain AL21

60S ribosomal protein L21

Chain AL42

eL42