J4_9BSS_008

3D structure

PDB id

9BSS (explore in PDB, NAKB, or RNA 3D Hub)

Description

45SRbgA particle in complex with RbgA and YphC. Class B

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

CAAAGG*CUUGACUGC*GCAGGGA*UCGG

Length

26 nucleotides

Bulged bases

9BSS|1|A|G|2411

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9BSS|1|A|C|2314
9BSS|1|A|A|2315
9BSS|1|A|A|2316
9BSS|1|A|A|2317
9BSS|1|A|G|2318
9BSS|1|A|G|2319
*
9BSS|1|A|C|2371
9BSS|1|A|U|2372
9BSS|1|A|U|2373
9BSS|1|A|G|2374
9BSS|1|A|A|2375
9BSS|1|A|C|2376
9BSS|1|A|U|2377
9BSS|1|A|G|2378
9BSS|1|A|C|2379
*
9BSS|1|A|G|2396
9BSS|1|A|C|2397
9BSS|1|A|A|2398
9BSS|1|A|G|2399
9BSS|1|A|G|2400
9BSS|1|A|G|2401
9BSS|1|A|A|2402
*
9BSS|1|A|U|2409
9BSS|1|A|C|2410
9BSS|1|A|G|2411
9BSS|1|A|G|2412

Current chains

Chain A

23S rRNA

Nearby chains

Chain Q

Large ribosomal subunit protein bL27