J4_9E73_001

3D structure

PDB id

9E73 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of RaiA RNA from Clostridium acetobutylicum

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

UUGAAAG*UCCACGUAAG*UGAGCAU*AAAGA

Length

29 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9E73|1|A|U|18
9E73|1|A|U|19
9E73|1|A|G|20
9E73|1|A|A|21
9E73|1|A|A|22
9E73|1|A|A|23
9E73|1|A|G|24
*
9E73|1|A|U|50
9E73|1|A|C|51
9E73|1|A|C|52
9E73|1|A|A|53
9E73|1|A|C|54
9E73|1|A|G|55
9E73|1|A|U|56
9E73|1|A|A|57
9E73|1|A|A|58
9E73|1|A|G|59
*
9E73|1|A|U|76
9E73|1|A|G|77
9E73|1|A|A|78
9E73|1|A|G|79
9E73|1|A|C|80
9E73|1|A|A|81
9E73|1|A|U|82
*
9E73|1|A|A|182
9E73|1|A|A|183
9E73|1|A|A|184
9E73|1|A|G|185
9E73|1|A|A|186

Current chains

Chain A

RNA (204-MER)

Nearby chains