J4_9EBB_004

3D structure

PDB id

9EBB (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the MPY and ribosome-tunnel occluding hibernation factors bound to the Mycobacterium tuberculosis C- 70S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

2.7 Å

Loop

Sequence

GGUUC*GGUGAG*CC*GCCCGUAC

Length

21 nucleotides

Bulged bases

9EBB|1|I|G|1472

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9EBB|1|I|G|1441
9EBB|1|I|G|1442
9EBB|1|I|U|1443
9EBB|1|I|U|1444
9EBB|1|I|C|1445
*
9EBB|1|I|G|1469
9EBB|1|I|G|1470
9EBB|1|I|U|1471
9EBB|1|I|G|1472
9EBB|1|I|A|1473
9EBB|1|I|G|1474
*
9EBB|1|I|C|1535
9EBB|1|I|C|1536
*
9EBB|1|I|G|1832
9EBB|1|I|C|1833
9EBB|1|I|C|1834
9EBB|1|I|C|1835
9EBB|1|I|G|1836
9EBB|1|I|U|1837
9EBB|1|I|A|1838
9EBB|1|I|C|1839

Current chains

Chain I

23S ribosomal RNA

Nearby chains

Chain 1

DUF5302 domain-containing protein

Chain 2

50S ribosomal protein bL34

Chain T

50S ribosomal protein L23