J4_9EBB_005

3D structure

PDB id

9EBB (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the MPY and ribosome-tunnel occluding hibernation factors bound to the Mycobacterium tuberculosis C- 70S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

2.7 Å

Loop

Sequence

GUAC*GGG*CAUAG*CGAAUUC

Length

19 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9EBB|1|I|G|1681
9EBB|1|I|U|1682
9EBB|1|I|A|1683
9EBB|1|I|C|1684
*
9EBB|1|I|G|1703
9EBB|1|I|G|1704
9EBB|1|I|G|1705
*
9EBB|1|I|C|1764
9EBB|1|I|A|1765
9EBB|1|I|U|1766
9EBB|1|I|A|1767
9EBB|1|I|G|1768
*
9EBB|1|I|C|1779
9EBB|1|I|G|1780
9EBB|1|I|A|1781
9EBB|1|I|A|1782
9EBB|1|I|U|1783
9EBB|1|I|U|1784
9EBB|1|I|C|1785

Current chains

Chain I

23S ribosomal RNA

Nearby chains