J4_9EBB_006

3D structure

PDB id

9EBB (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the MPY and ribosome-tunnel occluding hibernation factors bound to the Mycobacterium tuberculosis C- 70S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

2.7 Å

Loop

Sequence

CGACUG*CACAG*UGAC*GUAACG

Length

21 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9EBB|1|I|C|2005
9EBB|1|I|G|2006
9EBB|1|I|A|2007
9EBB|1|I|C|2008
9EBB|1|I|U|2009
9EBB|1|I|G|2010
*
9EBB|1|I|C|2022
9EBB|1|I|A|2023
9EBB|1|I|C|2024
9EBB|1|I|A|2025
9EBB|1|I|G|2026
*
9EBB|1|I|U|2061
9EBB|1|I|G|2062
9EBB|1|I|A|2063
9EBB|1|I|C|2064
*
9EBB|1|I|G|2213
9EBB|1|I|U|2214
9EBB|1|I|A|2215
9EBB|1|I|A|2216
9EBB|1|I|C|2217
9EBB|1|I|G|2218

Current chains

Chain I

23S ribosomal RNA

Nearby chains

Chain C

50S ribosomal protein L2

Chain x

Mitochondrial domain of uncharacterized function (DUF1713)