J4_9EBB_009

3D structure

PDB id

9EBB (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the MPY and ribosome-tunnel occluding hibernation factors bound to the Mycobacterium tuberculosis C- 70S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

2.7 Å

Loop

Sequence

AAACC*GAC*GGUCA*UUCU

Length

17 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9EBB|1|I|A|2880
9EBB|1|I|A|2881
9EBB|1|I|A|2882
9EBB|1|I|C|2883
9EBB|1|I|C|2884
*
9EBB|1|I|G|2912
9EBB|1|I|A|2913
9EBB|1|I|C|2914
*
9EBB|1|I|G|2969
9EBB|1|I|G|2970
9EBB|1|I|U|2971
9EBB|1|I|C|2972
9EBB|1|I|A|2973
*
9EBB|1|I|U|3007
9EBB|1|I|U|3008
9EBB|1|I|C|3009
9EBB|1|I|U|3010

Current chains

Chain I

23S ribosomal RNA

Nearby chains

Chain D

50S ribosomal protein L3

Chain J

50S ribosomal protein L13

Chain K

Large ribosomal subunit protein uL14