J4_9EC3_001

3D structure

PDB id

9EC3 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the ribosome-tunnel occluding hibernation factor bound to the Mycobacterium tuberculosis C- 70S ribosome carrying fMet-tRNA(fMet) and deacylated tRNA at ribosome P and E sites.

Experimental method

ELECTRON MICROSCOPY

Resolution

3.29 Å

Loop

Sequence

CUAAAC*GGGUUG*CCG*UAAG

Length

19 nucleotides

Bulged bases

9EC3|1|I|U|317, 9EC3|1|I|C|494

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9EC3|1|I|C|270
9EC3|1|I|U|271
9EC3|1|I|A|272
9EC3|1|I|A|273
9EC3|1|I|A|274
9EC3|1|I|C|275
*
9EC3|1|I|G|313
9EC3|1|I|G|314
9EC3|1|I|G|315
9EC3|1|I|U|316
9EC3|1|I|U|317
9EC3|1|I|G|318
*
9EC3|1|I|C|493
9EC3|1|I|C|494
9EC3|1|I|G|495
*
9EC3|1|I|U|510
9EC3|1|I|A|511
9EC3|1|I|A|512
9EC3|1|I|G|513

Current chains

Chain I

23S ribosomal RNA

Nearby chains

Chain H

50S ribosomal protein L9