J4_9EHO_007
3D structure
- PDB id
- 9EHO (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Octopus ribosome, hybrid 80S
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- CUG*CG*CUUAAGGUAG*UGAACG
- Length
- 21 nucleotides
- Bulged bases
- 9EHO|1|5|C|3629
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9EHO|1|5|C|3507
9EHO|1|5|U|3508
9EHO|1|5|G|3509
*
9EHO|1|5|C|3563
9EHO|1|5|G|3564
*
9EHO|1|5|C|3582
9EHO|1|5|U|3583
9EHO|1|5|U|3584
9EHO|1|5|A|3585
9EHO|1|5|A|3586
9EHO|1|5|G|3587
9EHO|1|5|G|3588
9EHO|1|5|U|3589
9EHO|1|5|A|3590
9EHO|1|5|G|3591
*
9EHO|1|5|U|3625
9EHO|1|5|G|3626
9EHO|1|5|A|3627
9EHO|1|5|A|3628
9EHO|1|5|C|3629
9EHO|1|5|G|3630
Current chains
- Chain 5
- 28S rRNA
Nearby chains
- Chain 3
- Transfer RNA; tRNA
- Chain A
- Large ribosomal subunit protein uL2
- Chain AA
- Small subunit ribosomal RNA; SSU rRNA
- Chain n
- eS32
Coloring options: