J4_9ELY_001

3D structure

PDB id

9ELY (explore in PDB, NAKB, or RNA 3D Hub)

Description

raiA RNA motif (Clostridium acetobutylicum)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

UUGAAAG*UCCACGUAAG*UGAGCAU*AAAGA

Length

29 nucleotides

Bulged bases

9ELY|1|A|C|80

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9ELY|1|A|U|18
9ELY|1|A|U|19
9ELY|1|A|G|20
9ELY|1|A|A|21
9ELY|1|A|A|22
9ELY|1|A|A|23
9ELY|1|A|G|24
*
9ELY|1|A|U|50
9ELY|1|A|C|51
9ELY|1|A|C|52
9ELY|1|A|A|53
9ELY|1|A|C|54
9ELY|1|A|G|55
9ELY|1|A|U|56
9ELY|1|A|A|57
9ELY|1|A|A|58
9ELY|1|A|G|59
*
9ELY|1|A|U|76
9ELY|1|A|G|77
9ELY|1|A|A|78
9ELY|1|A|G|79
9ELY|1|A|C|80
9ELY|1|A|A|81
9ELY|1|A|U|82
*
9ELY|1|A|A|182
9ELY|1|A|A|183
9ELY|1|A|A|184
9ELY|1|A|G|185
9ELY|1|A|A|186

Current chains

Chain A

raiA RNA

Nearby chains