J4_9F1D_006

3D structure

PDB id

9F1D (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mammalian quaternary complex of a translating 80S ribosome, NAC, MetAP1 and NatA/E-HYPK

Experimental method

ELECTRON MICROSCOPY

Resolution

3.26 Å

Loop

Sequence

CUC*GCC*GG*CGAGCG

Length

14 nucleotides

Bulged bases

9F1D|1|B5|G|1215, 9F1D|1|B5|C|1216

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9F1D|1|B5|C|883
9F1D|1|B5|U|884
9F1D|1|B5|C|885
*
9F1D|1|B5|G|985
9F1D|1|B5|C|986
9F1D|1|B5|C|987
*
9F1D|1|B5|G|1126
9F1D|1|B5|G|1127
*
9F1D|1|B5|C|1212
9F1D|1|B5|G|1213
9F1D|1|B5|A|1214
9F1D|1|B5|G|1215
9F1D|1|B5|C|1216
9F1D|1|B5|G|1217

Current chains

Chain B5

28S rRNA

Nearby chains

Chain BE

60S ribosomal protein L6

Chain BF

Ribosomal Protein uL30

Chain Bb

60S ribosomal protein L29