J4_9F1D_008
3D structure
- PDB id
- 9F1D (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mammalian quaternary complex of a translating 80S ribosome, NAC, MetAP1 and NatA/E-HYPK
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.26 Å
Loop
- Sequence
- GGUUC*GGUCAG*UC*GGCCGUAC
- Length
- 21 nucleotides
- Bulged bases
- 9F1D|1|B5|C|2280
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9F1D|1|B5|G|2249
9F1D|1|B5|G|2250
9F1D|1|B5|U|2251
9F1D|1|B5|U|2252
9F1D|1|B5|C|2253
*
9F1D|1|B5|G|2277
9F1D|1|B5|G|2278
9F1D|1|B5|U|2279
9F1D|1|B5|C|2280
9F1D|1|B5|A|2281
9F1D|1|B5|G|2282
*
9F1D|1|B5|U|2381
9F1D|1|B5|C|2382
*
9F1D|1|B5|G|2620
9F1D|1|B5|G|2621
9F1D|1|B5|C|2622
9F1D|1|B5|C|2623
9F1D|1|B5|G|2624
9F1D|1|B5|U|2625
9F1D|1|B5|A|2626
9F1D|1|B5|C|2627
Current chains
- Chain B5
- 28S rRNA
Nearby chains
- Chain B8
- 5.8S ribosomal RNA; 5.8S rRNA
- Chain BR
- Ribosomal protein L19
- Chain BX
- Large ribosomal subunit protein uL23
- Chain Bg
- 60S ribosomal protein L34
- Chain Bj
- Ribosomal protein L37
- Chain Bk
- 60S ribosomal protein L38
- Chain Bl
- 60S ribosomal protein L39-like
Coloring options: