J4_9FQZ_001

3D structure

PDB id

9FQZ (explore in PDB, NAKB, or RNA 3D Hub)

Description

CRYO-EM STRUCTURE OF HCT15 POLYSOMES BOUND TO EEF2, EBP1, AND SERBP1

Experimental method

ELECTRON MICROSCOPY

Resolution

2.85 Å

Loop

Sequence

CC*GAGUCG*CAAAGCG*UAAG

Length

19 nucleotides

Bulged bases

9FQZ|1|L5|C|309

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9FQZ|1|L5|C|111
9FQZ|1|L5|C|112
*
9FQZ|1|L5|G|278
9FQZ|1|L5|A|279
9FQZ|1|L5|G|280
9FQZ|1|L5|U|281
9FQZ|1|L5|C|282
9FQZ|1|L5|G|283
*
9FQZ|1|L5|C|304
9FQZ|1|L5|A|305
9FQZ|1|L5|A|306
9FQZ|1|L5|A|307
9FQZ|1|L5|G|308
9FQZ|1|L5|C|309
9FQZ|1|L5|G|310
*
9FQZ|1|L5|U|327
9FQZ|1|L5|A|328
9FQZ|1|L5|A|329
9FQZ|1|L5|G|330

Current chains

Chain L5

LSU rRNA

Nearby chains

Chain LL

60S ribosomal protein L13

Chain LN

60S ribosomal protein L15

Chain Lh

60S ribosomal protein L35

Chain Li

60S ribosomal protein L36