J4_9FQZ_006

3D structure

PDB id

9FQZ (explore in PDB, NAKB, or RNA 3D Hub)

Description

CRYO-EM STRUCTURE OF HCT15 POLYSOMES BOUND TO EEF2, EBP1, AND SERBP1

Experimental method

ELECTRON MICROSCOPY

Resolution

2.85 Å

Loop

Sequence

GG*UGUGAA*UGGAAAG*UC

Length

17 nucleotides

Bulged bases

9FQZ|1|L5|A|2696

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9FQZ|1|L5|G|2618
9FQZ|1|L5|G|2619
*
9FQZ|1|L5|U|2637
9FQZ|1|L5|G|2638
9FQZ|1|L5|U|2639
9FQZ|1|L5|G|2640
9FQZ|1|L5|A|2641
9FQZ|1|L5|A|2642
*
9FQZ|1|L5|U|2692
9FQZ|1|L5|G|2693
9FQZ|1|L5|G|2694
9FQZ|1|L5|A|2695
9FQZ|1|L5|A|2696
9FQZ|1|L5|A|2697
9FQZ|1|L5|G|2698
*
9FQZ|1|L5|U|2718
9FQZ|1|L5|C|2719

Current chains

Chain L5

LSU rRNA

Nearby chains

Chain LR

60S ribosomal protein L19

Chain LU

60S ribosomal protein L22

Chain Lg

60S ribosomal protein L34

Chain Lk

60S ribosomal protein L38