J4_9FQZ_007

3D structure

PDB id

9FQZ (explore in PDB, NAKB, or RNA 3D Hub)

Description

CRYO-EM STRUCTURE OF HCT15 POLYSOMES BOUND TO EEF2, EBP1, AND SERBP1

Experimental method

ELECTRON MICROSCOPY

Resolution

2.85 Å

Loop

Sequence

GAC(PSU)G*CAAAG*UGAUU*AUGA(A2M)C

Length

21 nucleotides

Bulged bases

None detected

QA status

Modified nucleotides: PSU, A2M

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9FQZ|1|L5|G|3634
9FQZ|1|L5|A|3635
9FQZ|1|L5|C|3636
9FQZ|1|L5|PSU|3637
9FQZ|1|L5|G|3638
*
9FQZ|1|L5|C|3650
9FQZ|1|L5|A|3651
9FQZ|1|L5|A|3652
9FQZ|1|L5|A|3653
9FQZ|1|L5|G|3654
*
9FQZ|1|L5|U|3690
9FQZ|1|L5|G|3691
9FQZ|1|L5|A|3692
9FQZ|1|L5|U|3693
9FQZ|1|L5|U|3694
*
9FQZ|1|L5|A|3821
9FQZ|1|L5|U|3822
9FQZ|1|L5|G|3823
9FQZ|1|L5|A|3824
9FQZ|1|L5|A2M|3825
9FQZ|1|L5|C|3826

Current chains

Chain L5

LSU rRNA

Nearby chains

Chain LA

60S ribosomal protein L8

Chain Ln

60S ribosomal protein L41

Chain Lp

60S ribosomal protein L37a

Chain S2

Small subunit ribosomal RNA; SSU rRNA