J4_9FQZ_009

3D structure

PDB id

9FQZ (explore in PDB, NAKB, or RNA 3D Hub)

Description

CRYO-EM STRUCTURE OF HCT15 POLYSOMES BOUND TO EEF2, EBP1, AND SERBP1

Experimental method

ELECTRON MICROSCOPY

Resolution

2.85 Å

Loop

Sequence

CUAAG*UUG*CC*GGG

Length

13 nucleotides

Bulged bases

9FQZ|1|L5|A|4234

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9FQZ|1|L5|C|4231
9FQZ|1|L5|U|4232
9FQZ|1|L5|A|4233
9FQZ|1|L5|A|4234
9FQZ|1|L5|G|4235
*
9FQZ|1|L5|U|4289
9FQZ|1|L5|U|4290
9FQZ|1|L5|G|4291
*
9FQZ|1|L5|C|4318
9FQZ|1|L5|C|4319
*
9FQZ|1|L5|G|4328
9FQZ|1|L5|G|4329
9FQZ|1|L5|G|4330

Current chains

Chain L5

LSU rRNA

Nearby chains

Chain LD

60S ribosomal protein L5

Chain LT

60S ribosomal protein L21

Chain Lo

60S ribosomal protein L36a