J4_9G5B_001
3D structure
- PDB id
- 9G5B (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Assembly intermediate of human mitochondrial ribosome small subunit (State A)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.2 Å
Loop
- Sequence
- CAAG*CGUUCCAG*CAC*GAAACAG
- Length
- 22 nucleotides
- Bulged bases
- 9G5B|1|A|A|700, 9G5B|1|A|U|711, 9G5B|1|A|C|815
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9G5B|1|A|C|698
9G5B|1|A|A|699
9G5B|1|A|A|700
9G5B|1|A|G|701
*
9G5B|1|A|C|708
9G5B|1|A|G|709
9G5B|1|A|U|710
9G5B|1|A|U|711
9G5B|1|A|C|712
9G5B|1|A|C|713
9G5B|1|A|A|714
9G5B|1|A|G|715
*
9G5B|1|A|C|800
9G5B|1|A|A|801
9G5B|1|A|C|802
*
9G5B|1|A|G|811
9G5B|1|A|A|812
9G5B|1|A|A|813
9G5B|1|A|A|814
9G5B|1|A|C|815
9G5B|1|A|A|816
9G5B|1|A|G|817
Current chains
- Chain A
- 12S mitochondrial rRNA
Nearby chains
- Chain 0
- 28S ribosomal protein S34, mitochondrial
- Chain 9
- Nitric oxide-associated protein 1
- Chain M
- 28S ribosomal protein S16, mitochondrial
- Chain U
- 28S ribosomal protein S26, mitochondrial
Coloring options: