J4_9GHC_002

3D structure

PDB id

9GHC (explore in PDB, NAKB, or RNA 3D Hub)

Description

Pre-release fusidic acid-locked Escherichia coli 70S ribosome with Staphylococus aureus EF-G and FusB (FusB-EF-G-70S)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.79 Å

Loop

Sequence

GAG*CAUAACG*CCAAAG*UGC

Length

19 nucleotides

Bulged bases

9GHC|1|A|C|183

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9GHC|1|A|G|142
9GHC|1|A|A|143
9GHC|1|A|G|144
*
9GHC|1|A|C|178
9GHC|1|A|A|179
9GHC|1|A|U|180
9GHC|1|A|A|181
9GHC|1|A|A|182
9GHC|1|A|C|183
9GHC|1|A|G|184
*
9GHC|1|A|C|193
9GHC|1|A|C|194
9GHC|1|A|A|195
9GHC|1|A|A|196
9GHC|1|A|A|197
9GHC|1|A|G|198
*
9GHC|1|A|U|219
9GHC|1|A|G|220
9GHC|1|A|C|221

Current chains

Chain A

16S rRNA

Nearby chains

Chain T

30S ribosomal protein S20