J4_9GJ5_001
3D structure
- PDB id
- 9GJ5 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human 80S ribosome in complex with NatA in distal position and Ebp1
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.61 Å
Loop
- Sequence
- CAAG*CCCAGCCC*GAC*GGUAG
- Length
- 20 nucleotides
- Bulged bases
- 9GJ5|1|1|A|218, 9GJ5|1|1|G|219
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9GJ5|1|1|C|196
9GJ5|1|1|A|197
9GJ5|1|1|A|198
9GJ5|1|1|G|199
*
9GJ5|1|1|C|215
9GJ5|1|1|C|216
9GJ5|1|1|C|217
9GJ5|1|1|A|218
9GJ5|1|1|G|219
9GJ5|1|1|C|220
9GJ5|1|1|C|221
9GJ5|1|1|C|222
*
9GJ5|1|1|G|226
9GJ5|1|1|A|227
9GJ5|1|1|C|228
*
9GJ5|1|1|G|240
9GJ5|1|1|G|241
9GJ5|1|1|U|242
9GJ5|1|1|A|243
9GJ5|1|1|G|244
Current chains
- Chain 1
- 28S rRNA
Nearby chains
- Chain B
- N-alpha-acetyltransferase 15, NatA auxiliary subunit
- Chain LC
- 60S ribosomal protein L4
- Chain LY
- Large ribosomal subunit protein uL24
Coloring options: