J4_9GR1_007
3D structure
- PDB id
- 9GR1 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. coli 70S-TEC complex in delivery state
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.17 Å
Loop
- Sequence
- GGAAG*CGCG*CAG*CGUAC
- Length
- 17 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J4_9GR1_007 not in the Motif Atlas
- Homologous match to J4_5J7L_019
- Geometric discrepancy: 0.0392
- The information below is about J4_5J7L_019
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J4_71729.5
- Basepair signature
- cWW-tSH-cHH-F-F-tHS-cWW-cWW-F-F-cWW
- Number of instances in this motif group
- 4
Unit IDs
9GR1|1|a|G|297
9GR1|1|a|G|298
9GR1|1|a|A|299
9GR1|1|a|A|300
9GR1|1|a|G|301
*
9GR1|1|a|C|316
9GR1|1|a|G|317
9GR1|1|a|C|318
9GR1|1|a|G|319
*
9GR1|1|a|C|323
9GR1|1|a|A|324
9GR1|1|a|G|325
*
9GR1|1|a|C|337
9GR1|1|a|G|338
9GR1|1|a|U|339
9GR1|1|a|A|340
9GR1|1|a|C|341
Current chains
- Chain a
- 23S ribosomal RNA
Nearby chains
- Chain e
- 50S ribosomal protein L4
- Chain t
- 50S ribosomal protein L24
Coloring options: