J4_9GR1_008
3D structure
- PDB id
- 9GR1 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. coli 70S-TEC complex in delivery state
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.17 Å
Loop
- Sequence
- CAAG*CGAAG*CGAG*CGUUAAG
- Length
- 20 nucleotides
- Bulged bases
- 9GR1|1|a|U|655, 9GR1|1|a|A|656
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- J4_9GR1_008 not in the Motif Atlas
- Homologous match to J4_5J7L_020
- Geometric discrepancy: 0.1352
- The information below is about J4_5J7L_020
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- J4_60168.1
- Basepair signature
- cWW-F-F-F-F-F-cWW-F-F-F-cWW-F-tSS-F-cWW
- Number of instances in this motif group
- 2
Unit IDs
9GR1|1|a|C|603
9GR1|1|a|A|604
9GR1|1|a|A|605
9GR1|1|a|G|606
*
9GR1|1|a|C|626
9GR1|1|a|G|627
9GR1|1|a|A|628
9GR1|1|a|A|629
9GR1|1|a|G|630
*
9GR1|1|a|C|637
9GR1|1|a|G|638
9GR1|1|a|A|639
9GR1|1|a|G|640
*
9GR1|1|a|C|652
9GR1|1|a|G|653
9GR1|1|a|U|654
9GR1|1|a|U|655
9GR1|1|a|A|656
9GR1|1|a|A|657
9GR1|1|a|G|658
Current chains
- Chain a
- 23S ribosomal RNA
Nearby chains
- Chain 2
- 50S ribosomal protein L35
- Chain e
- 50S ribosomal protein L4
- Chain k
- 50S ribosomal protein L15
Coloring options: