J4_9GUL_001

3D structure

PDB id

9GUL (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of FLuc-XBP1u+ stalled human 60S ribosome nascent chain complex

Experimental method

ELECTRON MICROSCOPY

Resolution

2.2 Å

Loop

Sequence

CC*GAGUCG*CAAAGCG*UAAG

Length

19 nucleotides

Bulged bases

9GUL|1|L5|C|309

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9GUL|1|L5|C|111
9GUL|1|L5|C|112
*
9GUL|1|L5|G|278
9GUL|1|L5|A|279
9GUL|1|L5|G|280
9GUL|1|L5|U|281
9GUL|1|L5|C|282
9GUL|1|L5|G|283
*
9GUL|1|L5|C|304
9GUL|1|L5|A|305
9GUL|1|L5|A|306
9GUL|1|L5|A|307
9GUL|1|L5|G|308
9GUL|1|L5|C|309
9GUL|1|L5|G|310
*
9GUL|1|L5|U|327
9GUL|1|L5|A|328
9GUL|1|L5|A|329
9GUL|1|L5|G|330

Current chains

Chain L5

28S rRNA

Nearby chains

Chain LL

60S ribosomal protein L13

Chain LN

60S ribosomal protein L15

Chain Lh

60S ribosomal protein L35

Chain Li

60S ribosomal protein L36