J4_9GUL_011

3D structure

PDB id

9GUL (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of FLuc-XBP1u+ stalled human 60S ribosome nascent chain complex

Experimental method

ELECTRON MICROSCOPY

Resolution

2.2 Å

Loop

Sequence

GUAAUC*GU(A1L3O)C*GUG*CGCC

Length

17 nucleotides

Bulged bases

9GUL|1|L5|A1L3O|4620, 9GUL|1|L5|U|4677

QA status

Modified nucleotides: A1L3O

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9GUL|1|L5|G|4587
9GUL|1|L5|U|4588
9GUL|1|L5|A|4589
9GUL|1|L5|A|4590
9GUL|1|L5|U|4591
9GUL|1|L5|C|4592
*
9GUL|1|L5|G|4618
9GUL|1|L5|U|4619
9GUL|1|L5|A1L3O|4620
9GUL|1|L5|C|4621
*
9GUL|1|L5|G|4676
9GUL|1|L5|U|4677
9GUL|1|L5|G|4678
*
9GUL|1|L5|C|4712
9GUL|1|L5|G|4713
9GUL|1|L5|C|4714
9GUL|1|L5|C|4715

Current chains

Chain L5

28S rRNA

Nearby chains

Chain LB

60S ribosomal protein L3

Chain LO

60S ribosomal protein L13a

Chain LV

60S ribosomal protein L23