J4_9H3N_004

3D structure

PDB id

9H3N (explore in PDB, NAKB, or RNA 3D Hub)

Description

50S subunit precursor C_(L22)-~H61

Experimental method

ELECTRON MICROSCOPY

Resolution

3.69 Å

Loop

Sequence

CGAUAAA*UC*GCUUG*CAG

Length

17 nucleotides

Bulged bases

9H3N|1|A|G|1271, 9H3N|1|A|A|1272, 9H3N|1|A|U|1273, 9H3N|1|A|A|1275, 9H3N|1|A|U|1647

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9H3N|1|A|C|1270
9H3N|1|A|G|1271
9H3N|1|A|A|1272
9H3N|1|A|U|1273
9H3N|1|A|A|1274
9H3N|1|A|A|1275
9H3N|1|A|A|1276
*
9H3N|1|A|U|1294
9H3N|1|A|C|1295
*
9H3N|1|A|G|1645
9H3N|1|A|C|1646
9H3N|1|A|U|1647
9H3N|1|A|U|1648
9H3N|1|A|G|1649
*
9H3N|1|A|C|2008
9H3N|1|A|A|2009
9H3N|1|A|G|2010

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain N

Large ribosomal subunit protein bL17