J4_9H8G_001

3D structure

PDB id

9H8G (explore in PDB, NAKB, or RNA 3D Hub)

Description

Complex 5 30S-GE81112

Experimental method

ELECTRON MICROSCOPY

Resolution

2.09 Å

Loop

Sequence

GAGUAAUG*UG*CUAG*CC

Length

16 nucleotides

Bulged bases

9H8G|1|A|U|121

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9H8G|1|A|G|115
9H8G|1|A|A|116
9H8G|1|A|G|117
9H8G|1|A|U|118
9H8G|1|A|A|119
9H8G|1|A|A|120
9H8G|1|A|U|121
9H8G|1|A|G|122
*
9H8G|1|A|U|239
9H8G|1|A|G|240
*
9H8G|1|A|C|286
9H8G|1|A|U|287
9H8G|1|A|A|288
9H8G|1|A|G|289
*
9H8G|1|A|C|311
9H8G|1|A|C|312

Current chains

Chain A

16S rRNA fragment (1078-MER)

Nearby chains

Chain P

Small ribosomal subunit protein bS16

Chain Q

Small ribosomal subunit protein uS17