J4_9H9L_001

3D structure

PDB id

9H9L (explore in PDB, NAKB, or RNA 3D Hub)

Description

Complex 3 (BODY) 30S-tRNA-GE81112

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

GAGUAAUG*UG*CUAG*CC

Length

16 nucleotides

Bulged bases

9H9L|1|A|U|121

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9H9L|1|A|G|115
9H9L|1|A|A|116
9H9L|1|A|G|117
9H9L|1|A|U|118
9H9L|1|A|A|119
9H9L|1|A|A|120
9H9L|1|A|U|121
9H9L|1|A|G|122
*
9H9L|1|A|U|239
9H9L|1|A|G|240
*
9H9L|1|A|C|286
9H9L|1|A|U|287
9H9L|1|A|A|288
9H9L|1|A|G|289
*
9H9L|1|A|C|311
9H9L|1|A|C|312

Current chains

Chain A

16S RNA (1078-MER)

Nearby chains

Chain P

Small ribosomal subunit protein bS16

Chain Q

Small ribosomal subunit protein uS17