J4_9HA1_008

3D structure

PDB id

9HA1 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Pooled 50S subunit C_(L22)- precursor states supplemented with Api137 - Canonical PET exit Api137

Experimental method

ELECTRON MICROSCOPY

Resolution

4.17 Å

Loop

Sequence

GGC*GAC*GGAAG*UGC

Length

14 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9HA1|1|A|G|2644
9HA1|1|A|G|2645
9HA1|1|A|C|2646
*
9HA1|1|A|G|2674
9HA1|1|A|A|2675
9HA1|1|A|C|2676
*
9HA1|1|A|G|2731
9HA1|1|A|G|2732
9HA1|1|A|A|2733
9HA1|1|A|A|2734
9HA1|1|A|G|2735
*
9HA1|1|A|U|2769
9HA1|1|A|G|2770
9HA1|1|A|C|2771

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain D

50S ribosomal protein L3

Chain J

Large ribosomal subunit protein uL13

Chain K

Large ribosomal subunit protein uL14