J4_9HA3_004

3D structure

PDB id

9HA3 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Pooled 50S subunit C_(L22)-~H61 precursor states supplemented with Api137

Experimental method

ELECTRON MICROSCOPY

Resolution

3.62 Å

Loop

Sequence

CGAUAAA*UC*GCUUG*CAG

Length

17 nucleotides

Bulged bases

9HA3|1|A|G|1271, 9HA3|1|A|A|1272, 9HA3|1|A|U|1273, 9HA3|1|A|A|1275, 9HA3|1|A|U|1647

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9HA3|1|A|C|1270
9HA3|1|A|G|1271
9HA3|1|A|A|1272
9HA3|1|A|U|1273
9HA3|1|A|A|1274
9HA3|1|A|A|1275
9HA3|1|A|A|1276
*
9HA3|1|A|U|1294
9HA3|1|A|C|1295
*
9HA3|1|A|G|1645
9HA3|1|A|C|1646
9HA3|1|A|U|1647
9HA3|1|A|U|1648
9HA3|1|A|G|1649
*
9HA3|1|A|C|2008
9HA3|1|A|A|2009
9HA3|1|A|G|2010

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain N

Large ribosomal subunit protein bL17