J4_9HA7_003

3D structure

PDB id

9HA7 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Pooled 50S subunit C-CP_(L22)-~H61 precursor states supplemented with Api137

Experimental method

ELECTRON MICROSCOPY

Resolution

4.37 Å

Loop

Sequence

AUAAGUAACGAUAAA*UC*GCUUGAGAGAAC*GACUCAGUGAAAUU

Length

43 nucleotides

Bulged bases

9HA7|1|A|G|1271, 9HA7|1|A|A|1272, 9HA7|1|A|U|1273, 9HA7|1|A|A|1275, 9HA7|1|A|U|1647

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9HA7|1|A|A|1262
9HA7|1|A|U|1263
9HA7|1|A|A|1264
9HA7|1|A|A|1265
9HA7|1|A|G|1266
9HA7|1|A|U|1267
9HA7|1|A|A|1268
9HA7|1|A|A|1269
9HA7|1|A|C|1270
9HA7|1|A|G|1271
9HA7|1|A|A|1272
9HA7|1|A|U|1273
9HA7|1|A|A|1274
9HA7|1|A|A|1275
9HA7|1|A|A|1276
*
9HA7|1|A|U|1294
9HA7|1|A|C|1295
*
9HA7|1|A|G|1645
9HA7|1|A|C|1646
9HA7|1|A|U|1647
9HA7|1|A|U|1648
9HA7|1|A|G|1649
9HA7|1|A|A|1650
9HA7|1|A|G|1651
9HA7|1|A|A|1652
9HA7|1|A|G|1653
9HA7|1|A|A|1654
9HA7|1|A|A|1655
9HA7|1|A|C|1656
*
9HA7|1|A|G|2004
9HA7|1|A|A|2005
9HA7|1|A|C|2006
9HA7|1|A|U|2007
9HA7|1|A|C|2008
9HA7|1|A|A|2009
9HA7|1|A|G|2010
9HA7|1|A|U|2011
9HA7|1|A|G|2012
9HA7|1|A|A|2013
9HA7|1|A|A|2014
9HA7|1|A|A|2015
9HA7|1|A|U|2016
9HA7|1|A|U|2017

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain N

Large ribosomal subunit protein bL17